Changes in version 0.4.1 (2023-08-24) - Fixed FSAdata-package \alias problem using the "manual approach" (i.e., adding a specific @aliases FSAdata-package line to FSAdata.R) suggested in an e-mail from Kurt Hornik on 19-Aug-2023. - Changed all http://derekogle.com/ URLs to https://derekogle.com/. - Updated CITATION file to meet CRAN requirements. Changes in version 0.4.0 (2022-12-11) - Changed my (DHO) email in DESCRIPTION. - Added Code of Conduct - Updated README.md - Updated R-CMD-check.yaml GitHub action to v2 (this addresses the issue with the action on Ubuntu-dev). - Added pkgdown site. - Added Suggests for dplyr, fishmethods, FSA, knitr, pkgdown, readxl, and rmarkdown (related to creating website). - Added pkgdown.yaml GitHub action. - Added "CSV file" links for all datasets' documentation files. - SpotVA2: Modified documentation to address #8 Changes in version 0.3.9 (2022-02-13) - Last version maintained by Derek Ogle. Transferring to fishR Core Team for next version. - Removed Travis-CI. - Added GitHub Actions for CI/CD (used usethis::use_github_action_check_standard()) - Renamed default repo from master to main (see this). Changes in version 0.3.8 (2019-05-18) - Corrected misuse of \concept in Rd files per CRAN request. Changes in version 0.3.7 (2019-03-24) - Added Encoding: UTF-8 to DESCRIPTION. - PygmyWFBC: Modified. Added the 2000 data (thought they were there but they were not). - RBTroutKenai: Modified. Corrected error (thanks to Robert Black). Changes in version 0.3.6 (2017-03-10) - BluegillIL: Modified. Changed names of variables. Changes in version 0.3.5 (2016-12-13) - .onAttach(): Modified. Streamlined package startup message. - Mosquitofish: Fixed small typos in documentation. Changes in version 0.3.4 (2016-08-23) - BluegillIL: Added. - Cabezon: Fixed small typo in documentation. - RBTroutKenai: Fixed small typo in documentation. - RuffeSLRH92: Added more specificity to documentation. - WalleyeErie2: Fixed small typo in documentation. - WalleyeML: Fixed small typo in documentation. - YERockfish: Fixed small typo in documentation. Changes in version 0.3.3 (2016-07-18) - Started using ROxygen v5.0.0. - Bonito: Added. - Mosquitofish: Added. - RWhitefishAI: Modified. Fixed typo in scientific names and length units. Fixes #3. Thanks to Peter Mous. - RWhitefishIR: Modified. Fixed typo in scientific names and length units. Fixes #3. Thanks to Peter Mous. - SnapperHG: Modified. Fixed typo in documentation. - StripedBass2: Modified. Fixed typo in length units. Fixes #4. Thanks to Peter Mous. - YPerchTL: Modified. Minor update to documentation. - YPerchSB1: Modified. Fixed typo in documentation. Changes in version 0.3.2 (2015-10-22) - Fixed LaTeX quotes in DESCRIPTION file. - Removed all \href{}{} and \url{} codes to websites that I don't control. The addresses are now "naked" such that the user will need to copy-and-paste them into a browser to view the web page rather than clicking on a hyper link. Hopefully this will eliminate problems with R CMD CHECK. - Added notes to all files that were used in IFAR. Changes in version 0.3.1 - DATE: 21-Oct-15 - Removed Imports for utils due to changes in FSAdata described below. - Lots of editorial changes to help pages to make it the datalist vignette in FSA work better an to make the documentation more consistent. - Changed all files in data-raw to CSV files. - Added and exported the FSAdataTopics object. - AfricanRivers: Added a topic to help documentation. - BGHRfish: Added. - BGHRsample: Added. - BlackDrum2001: Added. - Casselman1990: Added a topic to help documentation. - CCatfishNB: Added. - CreekChub: Added. - CreelMN: Added a topic to help documentation. - CutthroatALf: Modified. Removed href as it seemed inconsistent. - FSAdata: Modified. Fixed link to FSA package. Removed importFrom for read.table() from utils. - Ghats: Added a topic to help documentation. - LakeTroutEggs: Added a topic to help documentation. - PikeHL: Modified. Removed href as it seemed inconsistent. - ShadCR: Added. - SiscowetMI2004: Added. - StrugeonBG: Added. - WalleyeWad: Added. - WalleyeWyrlng: Added. - WhitefishLS: Added a topic to help documentation. Changes in version 0.3.0 (2015-10-06) - Released to CRAN Changes in version 0.2.2 - DATE: Oct15 - Converted all .txt files to .Rda files. Original .txt files are in the data-raw directory which was added to .Rbuildignore. Changes in version 0.2.1 - DATE: Sep15 - Updated README.md and DESCRIPTION to reflect the new websites. Changes in version 0.2.0 - DATE: Aug15 - Added importFrom for utils. - BluegilLM: Added. Moved from FSA. - CutthroatALF.R: Modified. Changed to use utils::read.table() rather than read.table(). - WalleyeErie2: Added. - WalleyeML: Added. Changes in version 0.1.9 - DATE: Jul15 - Removed several URLs that either did not work consistently or have been moved. Fixed several others. - Fixed title in DESCRIPTION. - Fixed CITATION. - Removed Suggests for FSA. - Added Travis CI. Changes in version 0.1.8 - DATE: Apr14 - Updated DESCRIPTION file (following this -- http://r-pkgs.had.co.nz/description.html). Also added LazyData: true. - Pathfinder: Added. - YPerchSB: Modified. Corrected bug with data. Changes in version 0.1.7 - DATE: Aug14 - Modified two examples to use interactive() because of use of FSA package. - BrookTroutNEWP1: Added. Use as an example to test removal() in the FSA package. - DarterMahon: Added. - LobsterPEI: Added. Used as an example to test depletion() in the FSA package. - ShrimpGuam: Added. - SnapperHG1: Added. Changes in version 0.1.6 - DATE: Jul14 - BullTroutRML1: Modified. Updated the source reference. - BullTroutRML2: Modified. Updated the source reference. - CutthroatALf: Added. - RuffeSLRH92: Modified. Changed the species variable to indiv. - SunfishIn: Modified. Updated example after changes to mrClosed() in FSA. - WalleyeConsumption: Modified. Updated the source reference. Changes in version 0.1.5 - DATE: Jun14 - Changed to using github and compiling under R 3.1.0. - Moved FSA to a "suggests" rather than "depends". - Made topic sections consistent, added concept fields, and cleaned up titles in the help files so that help.search() worked better. - Cleaned up help files (consistent spacing and labeling). - FSAdata.R: Modified. Updated help.search() hints to include the FSA package. - AlewifeLH: Modified. Changed example to use xtabs(). Cleaned up help file. Added link to reference. - BluegillWS: Deleted. Moved to FSAWs. - BluefishAge: Modified. Corrected reference. Cleaned up help file. - Cabezon: Modified. Changed example to use xtabs(). Cleaned up help file. - ChinookArg: Removed (moved to FSA). - CreelMN: Modified. Used a dontrun{} in the examples to remove dependency on FSA. Changed example to use xtabs(). Cleaned up help file. - Croaker1: Modified. Corrected reference. Changed example to use xtabs(). Cleaned up help file. - Croaker2: Modified. Corrected reference. Cleaned up help file. - GreensCreekMine: Added. - Herman: Modified. Modified a link to the article in the help file. Cleaned up help file. - JobfishSIO: Modified. Added a link to the article in the help file. Cleaned up help file. - LakeTroutALTER: Modified. Corrected reference. Cleaned up help file. - Morwong1: Modified. Changed example to use xtabs(). Cleaned up help file. - Morwong2: Modified. Changed example to use xtabs(). Cleaned up help file. - MulletBS: Modified. Changed example to use xtabs(). Cleaned up help file. - MuskieSLR: Modified. Changed example to use xtabs(). Cleaned up help file. - PikeHL: Modified. Added a note. Cleaned up help file. - RuffeSLRH92: Modified. Changed example to use xtabs(). Cleaned up help file. - RWhitefishAI: Added. - RWhitefishIR: Added. - SalmonidsMCCA: Added. - SardineLK: Modified. Corrected reference. Cleaned up help file. - SculpinALTER: Modified. Corrected reference. Cleaned up help file. - SnapperHG1: Added. - SpottedSucker1: Added. - SpotVA2: Modified. Corrected reference. Cleaned up help file. - StripedBass1: Modified. Corrected reference. Changed example to use xtabs(). Cleaned up help file. - StripedBass2: Modified. Corrected reference. Cleaned up help file. - StripedBass3: Modified. Corrected reference. Cleaned up help file. - StripedBass4: Modified. Corrected reference. Changed example to use xtabs(). Cleaned up help file. - StripedBass5: Modified. Corrected reference. Changed example to use xtabs(). Cleaned up help file. - StripedBass6: Modified. Corrected reference. Changed example to use xtabs(). Cleaned up help file. - SunfishIN: Modified. Corrected a data entry error. Added test example. Cleaned up help file. - WalleyeMN06a: Modified. Added link to reference. Cleaned up help file. - WalleyeMN06b: Modified. Added link to reference. Cleaned up help file. - WalleyePL: Added. - WalleyePL1: Deleted. Combined to form WalleyePL. - WalleyePL2: Deleted. Combined to form WalleyePL. - WalleyePL3: Deleted. Combined to form WalleyePL. - WalleyePL4: Deleted. Combined to form WalleyePL. - WalleyeWS: Deleted. Moved to FSAWs. - WhitefishLS: Modified. Corrected reference. Cleaned up help file. - YPerchTL: Modified. Corrected reference. Cleaned up help file. Changes in version 0.1.4 - DATE: Apr14 - Changed R dependency to >3.0.0 (because FSA package has that dependency). - Removed dependency on gdata (no longer needed when RuffeWS was moved to FSA). - Slight modifications to RD files (capitalized all common names per new AFS "rule", formatted around variables and topics to make easier to edit.) - BluefishAge: Modified. Removed link to original source (caused problems at check). - CrappieARMS: Modified. - Croaker1: Modified. Removed link to original source (caused problems at check). - Croaker2: Modified. Removed link to original source (caused problems at check). - Deckeretal1999: Added. - HumpbackWFCR: Added. - Menhaden1: Added. - StripedBass1: Added (from FSA). - StripedBass2: Modified. Removed link to original source (caused problems at check). - StripedBass4: Modified. Removed link to original source (caused problems at check). - StripedBass5: Modified. Removed link to original source (caused problems at check). - StripedBass6: Modified. Removed link to original source (caused problems at check). - WalleyeKS: Added. Changes in version 0.1.3 - DATE: Jun13 - Switched to using roxygen2 to create help files. - Added a Depends on FSA (note that FSA no longer depends on FSAdata). - Modified depends to >R2.14.0 to match FSA (which this depens on). - Moved the following data files to FSA: BluegillJL, BluegillLM, BrookTroutTH, CodNorwegian, CutthroatAL, Ecoli, KS2D_NR, LMBassWs, Mirex, PikeNY, PikeNYPartial1, RSDlit, RuffeWs, SMBassLS, SMBassWB, SpotVA1, StripedBass1, VBGMlit, WalleyeGerowLW, WR79, and WSlit, which eliminated the dependency of FSA on FSAdata. - .onAttach(): added, was .onLoad()` with a slight modification to avoid possible warnings on RCMD Check. - .onLoad(): deleted, changed to .onAttach(). - CreelMN: modified examples in help file to reflect dependency on FSA. - InchLake2: modified by changing "Largemouth Bass (<8)" to "Largemouth Bass" and "Yellow Perch (<5)" to "Yellow Perch". Also removed the sex and mat variables. - PikeHL: modified by adding URL to the source report. Changes in version 0.1.2 - DATE: 25Nov12 - Deleted Depends on utils package (wasn't needed). - Switched to using Project development in RStudio. - Switched to using semantic versioning for version numbers (which means that the hyphen before the last number in the version is replaced with a period). - Ecoli: Added (from NCStats). - Mirex: Added (from NCStats). Changes in version 0.1-1 - DATE: 20Nov12 - Added a namespace (for 2.14.0 compatability) - Switched to compiling under R version 2.13.1 (32-bit). - Changed license specification from "GPL version 2 or newer" to "GPL (>= 2)" to avoid warning on check. - .onLoad(): Modified. Moved the startup message into packageStartupMessage() in hopes of eliminating the warning when checking the package. - AnchovetaChile: Modified. Updated to the actual data from the author. - Cabezon: Added. This is the actual data from the author. - ChinookArg: Added. - CreelMN: Added. - KS2D_NR: Added from NCStats. - SardineChile: Added. This is the actual data from the author. - YERockfish: Added. This is the actual data from the author. Changes in version 0.1-0 - DATE: 19Aug11 - Moved to compiling under 2.13.0 (32 bit) - Changed dependency to >2.11.1 - Modified description file to show my e-mail address. - SquareLakePopn: removed. Moved to NCStats package. - VBGMlit: modified. Changed "to" variable to "t0". Changes in version 0.0-9 - DATE: 31Jan11 - added examples to each rd file. The examples show the structure and first few rows of each data file. In addition, many provide a simple plot or table of the raw data. The idea was to provide the user with a quick method to see what the data looked like. - .First.lib(): modified -- Changed to include version number of loaded version. - BassFL: modified -- corrected misspelling of SantaFe in first few rows. - BSkateGB: added -- used for stock-recruitment analysis. - BrookTroutNC: added -- used for stock-recruitment analysis. - DarterOnt: added -- used for growth modeling. - FSAdata-package.Rd: modified -- added directions on how to use help.search() to find data frames that can be used for specific concepts/topics. - KingCrabAK: added -- used for stock-recruitment analysis. - SimonsonLyons: added -- used for removal estimates. - SLampreyGL: added -- used for stock-recruit relationships. - VendaceLP2: added -- used for stock-recruit relationships. - YPerchCB1: added -- used for catch-curve analysis. - YPerchCB2: modified -- added a year-class variable and changed the recruit variable to recruits (notice the s). Changes in version 0.0-8 - DATE: 31Jul10 - moved to compiling under 2.11.1. - BassFL: added -- used for catch curve analysis. - BrookTroutOnt: added -- used for Petersen mark-recapture analysis. - ChinookKR: added -- used for stock-recruitment. - Hake: added -- used for stock-recruitment. - HerringBWE: added -- used for stock-recruitment. - LakeTroutGIS: modified -- changed "recruit" variable to "recruits". - PSalmonAK: added -- used for stock-recruitment analysis. - RedDrum: added -- used for von Bertalanffy models (including double von B). - SockeyeSR: added -- used for stock-recruitment. - TPrawnsEG: added -- used for stock-recruitment. - WalleyeMN06a: added -- used for catch curve analysis. - WalleyeMN06b: added -- used for multiple closed mark-recapture analysis. - WhiteGrunt1: added -- used for catch curve analysis. - WhiteGrunt2: added -- used for von Bertalanffy models. Changes in version 0.0-7 - DATE: 5Jun10 - AHerringChile: added -- used as an example for seasonal von Bertalanffy models. - AnchovetaChile: added -- used as an example for seasonal von Bertalanffy models. - WAEConsumption: added -- used as an example for non-linear models. Changes in version 0.0-6 - DATE: 17Dec09 - moved to compiling under 2.10.1. - updated FSAdata.rd - RBTroutKenai: added -- used for Fabens method example. Changes in version 0.0-5 - DATE: 1Apr09 - added dependency to gdata for example in RuffeWs. - modified all .Rdata data files to be .txt data files. - changed to compiling under 2.7.0. - added CITATION file. - .First.lib: Added - BluegillIL1, LMBassIL1: deleted and replaced with InchLake. - InchLake1: Added -- replaces old BluegillIL1 and LMBassIL1 and includes 2008 data. - InchLake2: Added -- can be used for length weight and relative weight analyses. - MuskieWI06MR: Added -- can be used for Petersen mark-recapture analyses. - RuffeWs: Added -- can be used for standard and relative weight analyses. - WalleyeGerowLW: Added -- can be used for standard and relative weight analyses. Specifically used to test results of emp() function in FSA against Gerow's Excel Tool. Changes in version 0.0-4 - DATE: 15May08 - moved to RForge. - BluegillLM1: Added -- can be used for length-weight analysis. - BrownTroutVC1: Added -- can be used for M/R by length-class. - RSDlit: Changed .E variables to .in and changed .m variables to .cm. This better reflects the units of measurement. - StripedBass2, StripedBass3: Added -- can be used for growth modeling and age-length key. - StipedBass4, StripedBass5, StripedBass6: Added -- can be used for age comparison (bias and precision) analyses. Changes in version 0.0-3 - DATE: unknown - changed to compiling under R 2.6.1. - redid nearly all RD files for (1) consistency, (2) to make LaTeX work, and (3) added concept and topics sections for search purposes. - BloaterLH: changed variable Year to year (note lower-case y). - BluegillWs: Added -- can be used to test the rlp() function in the FSA package. - BrkTrtTH: Changed name to BrookTroutTH. - BrookTroutNEWP: Added -- can be used for removal estimates. - BullTroutRML1: Added -- can be use for length-weight analysis. - BullTroutRML2: Added -- can be use for size-at-age growth modeling. - HardingLakeNP: changed name to PikeHL (consistent with other namings). - JonesStockwell: Added -- can be used for removal estimates. - LMBassWs: Added -- can be used to test the rlp() function in the FSA package. - LizardFish: changed name to Lizardfish (note lower-case f). - Muskie1: changed name to MuskieSLR. - PacFlounder: changed name to HalibutPAC. - PikeIL: Added -- can be used for depletion estimates. - SalmonAPD: Added -- can be used for depletion/removal estimates. - SardineKL: Added -- can be used for size-at-age growth modeling. - SockeyeKL: changed variable Year to year (note lower-case y). - TroutAPD: Added -- can be used for depletion/removal estimates. - WalleyeWs: Added -- can be used to test the rlp() function in the FSA package. - WSlit: added information for bridgelip and largescale suckers. Changes in version 0.0-2 - DATE: unknown - added BullTroutTC -- can be used for catch curve mortality estimation. - added FlatheadATL -- can be used for catch curve mortality estimation. - added SunfishLP -- can be used for catch curve mortality estimation. - added WalleyePS -- can be used for age bias and precision estimation.